FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64358957
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTACGC154550.08.161055145
ACGTACG168300.08.054221145
GTACGCA177450.06.699369145
TACGCAA195750.06.5544696145
ACACGTC557200.06.5436935145
ACGTCTG559200.06.1314054145
ATCGGAA862350.06.0606294145
GATCGGA869050.05.9888816145
TAGATCG352600.05.941302145
CGTCTGA497250.05.9185767145
CACGTCT610750.05.886867145
TCGGAAG850100.05.8324647145
ACCGCGC174100.05.82984971
AGATCGG913100.05.795228145
AGTCACG303300.05.7359433145
CACGTAC248050.05.698511145
CGGAAGA853150.05.6926627145
GTCACGT287100.05.504138145
GCACACG723050.05.4738183145
ACGCAAA241350.05.3761544145
Produced by FastQC (version 0.11.5)