FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63631284
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG51700.011.776813145
AGCGTCG560450.06.479476145
CGTCGTG508350.06.41636145
CGTGTAG502650.06.2872367145
TCGTGTA497200.05.977117145
GCGTCGT521450.05.9690413140-144
GTCGTGT517150.05.9287467145
ACCGCGC171200.05.6337881
AGATCGG918150.05.6287885145
AAGAGCG788150.05.628356145
ATCGGAA863550.05.6237545145
GAGCGTC638800.05.514554145
TAGATCG349850.05.511107145
GATCGGA866350.05.4800806145
TCGGAAG857500.05.350675145
TGGTCGC156800.05.2698445145
CGGAAGA866800.05.176197145
GCGCGAT100250.05.14310362
AGAGCGT698300.05.109222140-144
CGCGATC102850.05.075013
Produced by FastQC (version 0.11.5)