FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64247424
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG51950.010.465492145
AGCGTCG586650.07.1916385145
CGTCGTG529900.06.716941145
GTCGTGT542850.06.3430443145
CGCCGTA98350.06.3388147145
CGTGTAG522350.06.328302145
TCGTGTA519650.06.249583145
GTCGCCG135000.06.12146145
GCGTCGT543500.06.089867140-144
GATCGGA903750.06.0158486145
AGATCGG954250.05.834223145
ACCGCGC173350.05.80007171
GAGCGTC669450.05.739072145
CGGAAGA893900.05.579348145
ATCGGAA894850.05.500517145
AAGAGCG820950.05.342231145
TCGGAAG887450.05.334003145
AGAGCGT726600.05.325429140-144
TAGATCG353800.05.265738145
TGGTCGC164350.05.0723834145
Produced by FastQC (version 0.11.5)