FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63771059
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTACGC141900.08.582513145
ACGTACG153900.07.819104145
CACGTAC238250.06.967712145
GTACGCA164250.06.92918145
GTCACGT279350.06.9027243145
ACACGTC537000.06.2907033145
AGTCACG283950.06.2037168145
AGATCGG901300.06.193112145
TCACGTA274550.06.178485145
TACGCAA181750.06.14234145
CGTCTGA476900.06.1410356145
GATCGGA848800.05.978335145
CGGAAGA835250.05.9451346145
TCGGAAG833000.05.856763145
ACCGCGC164900.05.81227061
GCACACG703750.05.8096275145
CACGTCT591600.05.746882145
ATCGGAA843700.05.739526145
ACGTCTG541350.05.6375647145
TAGATCG339700.05.5453787140-144
Produced by FastQC (version 0.11.5)