FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52998111
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC142950.011.005081
CGCGATC91250.010.0993843
GCGCGAT91550.09.5114552
CTCACGC453750.09.09954553
GCTCACG459350.09.0360032
GGCGCGA110950.08.7460161
ACCGCAC145800.08.5210441
ACCGTGC163000.08.208191
ACGCGAG28650.08.1049332
CCGCGCC212400.07.68691542
AACGCGA25953.6379788E-127.6487421
GCGATCT191050.07.36841774
TCACGCC584900.07.1459574
CACGCCT610050.06.97929245
ACGCCTG589450.06.7392326
CGCCTGT633500.06.5909717
CGCGAGT30202.1282176E-106.4875533
CGCGCCC174750.06.311763
CCGTGCC200750.06.28952362
CACGTCT461150.06.2407117145
Produced by FastQC (version 0.11.5)