FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753467

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753467
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53684707
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC142750.011.6072241
CGCGATC96450.010.2977773
GCGCGAT96700.09.6713792
CTCACGC452750.09.4155143
GCTCACG461900.09.3859542
GGCGCGA115000.08.4527511
ACCGCAC149850.08.1578051
CCGCGCC215050.07.75378132
CACGCCT615500.07.47878745
ACCGTGC165600.07.47086571
GCGATCT208250.07.38025864
ACTGCGC153000.07.31600761
TCACGCC599550.07.303524
ACGCCTG592650.07.2777546
ACGCGAT14104.3899177E-57.19836852
CGCCTGT637700.07.07054047
CGCGCCC172650.06.844573
GACGCGA21156.4281994E-76.6155391
CTCGTAT97800.06.5974717145
CGCCCGG262000.06.50207665
Produced by FastQC (version 0.11.5)