FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69473436
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG204250.06.47933245-49
ACACGTC966050.06.2757616145
CGTCTGA846550.06.202199145
CACGTCT999800.06.1509542145
ATCGGAA1522200.06.1172056145
GATCGGA1558350.05.984608145
ACGTCTG933900.05.9560013145
AGATCGG1598950.05.9188232145
CAGATCG721800.05.867536145
GCACACG1171600.05.8617916145
TCGGAAG1487300.05.8267865145
TAGATCG600450.05.700657145
ATCGCAA363600.05.6843495145
GCCGTCT237100.05.667299750-54
TCGCAAT300000.05.6565857145
CGGAAGA1461900.05.6353436145
ATGCCGT239200.05.61746145-49
CGTATGC232450.05.59974645-49
TGCCGTC232550.05.510156650-54
CTCGTAT233050.05.46706540-44
Produced by FastQC (version 0.11.5)