FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69473436
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG55650.015.397089145
AGCGTCG1030100.06.40776145
CGTCGTG935350.06.4047413145
TCGTGTA892850.06.3761625145
CGCCGTA197850.06.374715345-49
CGTGTAG879000.06.327931145
GAGCGTC1135150.06.24336145
GTCGTGT927350.06.0684786145
ATCGGAA1548950.06.0099716145
AAGAGCG1346650.05.996141145
GCGTCGT964650.05.9467425145
AGATCGG1623300.05.801803145
GATCGGA1580850.05.7876425145
TCGGAAG1509350.05.667312145
GCCGTAT231500.05.61718945-49
TCGCCGT219150.05.583140445-49
CGGAAGA1493850.05.4198804145
AGAGCGT1220500.05.4081397145
CCGTATC246400.05.348115445-49
GTCGCCG240350.05.31393240-44
Produced by FastQC (version 0.11.5)