FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70251404
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG205900.06.920706745-49
CGTCTGA867100.06.7553377145
CACGTCT1023500.06.432239145
ACGTCTG948500.06.2750797145
ACACGTC988200.06.258028145
AGATCGG1634650.06.243143145
ATCGGAA1553700.06.2086983145
TAGATCG628850.06.1751776145
TCGCAAT309900.06.159946145
CGTATGC237950.06.061646545-49
GCCGTCT246950.06.034556450-54
ATGCCGT245550.05.99800845-49
CAGATCG732100.05.978464145
TCGGAAG1515650.05.9622912145
TGCCGTC242600.05.87984150-54
GATCGGA1589900.05.866459145
CTCGTAT242200.05.722042640-44
ATCGCAA372350.05.711616145
CGGAAGA1490200.05.611134145
GCACACG1187750.05.603857145
Produced by FastQC (version 0.11.5)