FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70641061
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG211000.07.138478345-49
ACACGTC1012600.06.5193214145
AGATCGG1668650.06.3150764145
ACGTCTG975800.06.236769145
CGTATGC242750.06.198843545-49
CGTCTGA892250.06.194048145
GCCGTCT248250.06.18379650-54
TGCCGTC242500.06.145112550-54
ATGCCGT249350.06.08709245-49
TCGGAAG1546300.05.9458838145
CACGTCT1047100.05.929996145
GATCGGA1624150.05.9246974145
CTCGTAT242500.05.864500540-44
TAGATCG640600.05.827102145
ATCGGAA1589100.05.7811704145
CAGATCG750800.05.755316145
CGTCTTC286300.05.71131650-54
TCTCGTA257300.05.651124540-44
GCACACG1231200.05.6331487145
CACACGT1204550.05.534703145
Produced by FastQC (version 0.11.5)