FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69196611
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG190000.07.172754345-49
CGTCTGA828550.06.847132145
TAGATCG589550.06.4276156145
GATCGGA1519900.06.3262925145
TCGGAAG1448700.06.240588145
CGTATGC221700.06.192928345-49
GCCGTCT225750.06.177183650-54
ACACGTC935200.06.1362824145
ATGCCGT231000.06.07540345-49
TGCCGTC225750.06.02307550-54
CACGTCT970700.05.911869145
AGATCGG1558400.05.8666363145
GCACACG1135500.05.8481226145
CTCGTAT225500.05.8445640-44
ACGTCTG903900.05.8257384145
CACACGT1115750.05.8147464145
ATCGGAA1484900.05.7406783145
CAGATCG692850.05.6477556145
ATCGCAA355100.05.591712145
CGTCTTC262200.05.5672450-54
Produced by FastQC (version 0.11.5)