FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57659169
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG48550.05.9765058145
GCGTCGT376250.05.687509145
TCGTGTA371400.05.605529145
AGATCGG644100.05.541003145
CGTCGTG369600.05.5346956145
AGCGTCG405050.05.4801116145
GAGCGTC465350.05.46752649
ATCGGAA619650.05.3733215145
CGTGTAG386900.05.343462145
TCGGAAG624200.05.276047145
GTCGTGT386050.05.204905145
GATCGGA619950.05.113301145
AGAGCGT520550.05.0409188
Produced by FastQC (version 0.11.5)