FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57499424
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG48000.08.309789145
AGCGTCG408600.06.194348145
GTCGTGT385050.05.9328303145
AGATCGG646300.05.846178145
CGTCGTG370900.05.729007145
GAGCGTC471500.05.5189559
ATCGGAA618100.05.5145187145
GATCGGA617800.05.5054584145
GCGTCGT376450.05.195853140-144
TCGGAAG624050.05.1830335145
TAGATCG242900.05.1651998145
AGAGCGT525650.05.07465558
Produced by FastQC (version 0.11.5)