FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57556946
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG48600.07.907725145
AGATCGG634550.05.8165283145
AGCGTCG399700.05.8053417145
CGTCGTG365550.05.653404145
GAGCGTC465950.05.4934773145
TCGGAAG612900.05.4186087145
GTCGTGT377850.05.335036145
GCGTCGT369200.05.25856140-144
TCGTGTA363900.05.2207294145
GATCGGA606100.05.1803074145
ATCGGAA611150.05.0900426145
AAGAGCG592750.05.003382145
Produced by FastQC (version 0.11.5)