FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753519

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753519
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61247062
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA690900.06.317226145
ATCGGAA689750.06.243388145
AGATCGG727750.06.2372437145
TCGGAAG686800.06.037191145
CGTCTGA404950.05.9818177145
CGGAAGA683950.05.881541145
TAGATCG279550.05.6986885145
ACACGTC446500.05.604377145
CACACGT596800.05.35089145
GCACACG600850.05.193756145
CACGTCT511750.05.188303145
ACGTCTG473500.05.1772633145
ACCGCGC175600.05.0652631
Produced by FastQC (version 0.11.5)