FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60341427
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG65700.014.456193145
AGAGCGG185400.06.217781145
CGTCGTG1046750.06.0882707145
AGCGTCG1150600.05.822314145
CGTGTAG981700.05.472521145
CGCCGTA248300.05.4602547145
TCGTGTA988700.05.455775145
GAGCGTC1243850.05.3974795145
GCGTCGT1076450.05.2444696140-144
ATCGGAA1641700.05.2420955145
AGATCGG1726700.05.2359753145
CGGAAGA1596250.05.15517145
GTCGTGT1028750.05.152237140-144
TAGATCG612750.05.1233335145
Produced by FastQC (version 0.11.5)