FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60470686
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTACGC380500.06.459191145
GTACGCA394500.06.43212145
CACGTAC487450.06.335963145
ACGTACG399950.06.253836145
ACACGTC1067900.06.055742145
AGTCACG571200.06.041598145
CGCAAAT379200.05.9268847145
TACGCAA398200.05.917186145
CGTCTGA954350.05.902642145
GTCACGT549200.05.8479857145
TCACGTA541200.05.8138666145
ACGCAAA431750.05.5749226145
TATGCCG216600.05.556262145
ACGTCTG1029450.05.54246145
CACGTCT1091200.05.5145082145
CGTATGC248800.05.5073733145
TCGTATG256800.05.4487314145
GCACACG1265750.05.2981825145
ATCGGAA1604800.05.2766104145
GATCGGA1639850.05.247829145
Produced by FastQC (version 0.11.5)