FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753533

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753533
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60168392
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTACGC389700.07.3108063145
GTACGCA394350.06.985618145
TCGCGTA19251.2470373E-66.778676145
ACGTACG409200.06.696676145
GTCACGT557850.06.0558014145
TCACGTA552400.06.0368066145
ACGCAAA436300.05.981642145
CTCGTAT248100.05.9316072145
CACGTAC495000.05.8434696145
CGTCTGA948900.05.768058145
AGTCACG582300.05.7517276145
ACACGTC1066800.05.6470437145
ATCGGAA1600350.05.61707145
ACGTCTG1026950.05.590865145
AGATCGG1686200.05.589042145
CACACGT1238350.05.5555353145
CACGTCT1096300.05.495089145
TCTCGTA262750.05.435339145
CGCAAAT380600.05.3523026145
TACGCAA402950.05.343286145
Produced by FastQC (version 0.11.5)