FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64018758
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC163550.07.50012541
CGTGATA371500.06.6151304145
GCGCGAT111350.06.3170912
CGTCTGA976950.06.136641145
CACAACG501650.06.1272078145
CGCGATC112750.06.10836943
CACGTCT1120500.06.0491905145
ACGTCTG1058150.06.0219784145
TATGCCG205950.05.98423545-49
ACACGTC1097650.05.957173145
CTCGTAT237050.05.932794145
ACAACGT491900.05.924433145
TCGGAAG1680500.05.888324145
GCACACG1314000.05.7983565145
AACGTGA481800.05.792839145
ATCGGAA1725500.05.7347593145
CACACGT1278350.05.7332244145
AGATCGG1822050.05.701425145
CTCACGC510050.05.614393
CGGAAGA1649400.05.608184145
Produced by FastQC (version 0.11.5)