FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64962995
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC176450.07.02689361
CGTGATA377000.06.384593145
CTCACGC522150.06.2198673
TATGCCG209650.06.177519345-49
CACGTCT1162300.06.1627593145
CGTCTGA995400.06.1618233145
ACGTCTG1089150.06.1107073145
GCTCACG536400.06.0422972
CACAACG515400.05.9642787145
ACACGTC1124000.05.9083424145
GCACACG1351350.05.853201145
CACACGT1315450.05.8365755145
ACAACGT497700.05.8122163145
GATCGGA1802350.05.6677194145
CTCGTAT242200.05.6574945145
CGCGATC107900.05.64363
TCGGAAG1713950.05.592034145
AACGTGA485100.05.544714145
AGATCGG1856100.05.523121145
GCCGTCT243100.05.481922650-54
Produced by FastQC (version 0.11.5)