FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64792173
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGATC103850.06.9107213
ACCGCGC176000.06.76295661
GCGCGAT106300.06.54888532
CGTCTGA996200.06.3164916145
CACAACG518150.06.1840005145
CTCACGC525750.06.1496483
TATGCCG212150.06.075609745-49
GCTCACG536500.06.02829552
CGTGATA382800.05.9464865145
ACACGTC1123900.05.9084086145
ACGTCTG1081450.05.9057107145
GGCGCGA133200.05.8470381
TCTCGTA258950.05.795049145
ACAACGT507150.05.760648145
AGATCGG1833300.05.757455145
CACGTCT1154500.05.751806145
GCACACG1337800.05.651918145
TAGATCG667850.05.6119566145
AACGTGA491250.05.607687145
ATCGGAA1733150.05.604945145
Produced by FastQC (version 0.11.5)