FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005753553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46786438
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA347500.06.800781145
GATCGGA588000.06.139712145
TAGATCG229100.05.9487915145
AGATCGG609400.05.9478984145
ACGTCTG395300.05.850054145
CACGTCT426650.05.8279843145
ATCGGAA586200.05.762834145
TATGCCG80700.05.677631445-49
ACACGTC387850.05.5999126140-144
TCGGAAG580400.05.3957567145
CGGAAGA581850.05.3449326145
GCACACG506350.05.068138145
CACACGT496650.05.064948145
Produced by FastQC (version 0.11.5)