FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005753561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47633765
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA357150.06.272397145
GATCGGA610250.06.165741145
TCGGAAG601650.06.097226145
ATCGGAA605300.05.8688245145
AGATCGG632000.05.701184145
TAGATCG233150.05.6592865145
ACACGTC403600.05.622363145
GCACACG521350.05.6040425145
CGGAAGA602400.05.584171145
ACGTCTG407850.05.581551145
TATGCCG87900.05.37699945-49
CACGTCT441000.05.04691145
Produced by FastQC (version 0.11.5)