FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005753565

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753565
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47157263
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC393650.05.893023145
CGTCTGA348050.05.87362145
AGATCGG620950.05.8606462145
GATCGGA598400.05.839206145
TCGGAAG597250.05.765485145
TATGCCG86500.05.6319245-49
ATCGGAA598750.05.581537145
TAGATCG227450.05.5138955145
GCACACG511950.05.508336145
ACGTCTG397950.05.4467955145
CACGTCT433400.05.1852674145
CGGAAGA593250.05.1787105140-144
Produced by FastQC (version 0.11.5)