FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55938713
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG72950.017.192894145
AGAGCGG188500.05.9998646145
CGTGTAG1155200.05.7737613145
CGTCGTG1244450.05.755826145
GTCGCCG339500.05.744347145
GTGGTCG411900.05.7203126145
GGTCGCC377600.05.6255345145
AGCGTCG1369450.05.585145145
TCGTGTA1163600.05.5202427145
CGCCGTA277400.05.514475145
GTCGTGT1218900.05.436336145
CGTATCA299550.05.372938145
GCGTCGT1284500.05.313226140-144
TCTCGGT535500.05.293531145
CCGTATC301550.05.265177145
GTGTAGG1320950.05.2633276145
CTCGGTG544600.05.245015145
TCGCCGG49801.4551915E-115.240845145
AAGAGCG1716250.05.238046145
AGATCGG2040400.05.233782145
Produced by FastQC (version 0.11.5)