FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57210395
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG71950.016.421936145
AGAGCGG185400.06.4512186145
AGCGTCG1396500.05.860309145
CGTGTAG1183450.05.610649145
CGTCGTG1265350.05.6026793145
GTCGCCG351250.05.5926867145
GAGCGTC1497900.05.4394007145
TCGTGTA1185750.05.3552346145
GCGTCGT1307300.05.3175416145
GTCGTGG116100.05.307063145
AGATCGG2101500.05.301662145
AAGAGCG1754050.05.289755145
CGCCGTA291550.05.270968145
GTCGTGT1236550.05.27006145
CTCGGTG561700.05.200776145
TCGGAAG1958350.05.167288145
GTGGTCG427500.05.154719145
CGGAAGA1930100.05.145272145
TCGCCGG52701.4551915E-115.089307145
TCGGTGG526900.05.021486145
Produced by FastQC (version 0.11.5)