FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56609979
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG77450.015.256678145
AGAGCGG202050.07.032197145
TACGGCG16103.4185417E-56.75417386
TCGCCGG55650.06.382998145
CGTCGTG1290550.05.819407145
GTCGCCG365950.05.804164145
TCGTGTA1209500.05.5560694145
CGTGTAG1208200.05.514047145
AGCGTCG1422200.05.469314145
GCGTCGT1335150.05.41869145
GTCGTGT1261400.05.3217196145
GTCGTGG118800.05.308803145
GGTCGCC403550.05.2992992145
GTGGTCG438200.05.2276745145
GAGCGTC1526700.05.20416145
CGCCGTA299350.05.158152145
ATCGGAA2016950.05.132476145
TCGGTGG541550.05.113504145
TCGGAAG1975100.05.0944138145
TGGTCGC402900.05.055951145
Produced by FastQC (version 0.11.5)