FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53987732
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54500.07.981624145
AGCGTCG445900.06.129717145
CGTCGTG400550.05.792016145
AGATCGG713200.05.540152145
CGTGTAG409850.05.4306264145
GATCGGA678550.05.3208866145
GCGTCGT408950.05.3184805145
ATCGGAA680900.05.3025227145
CGGAAGA688850.05.209752145
TCGTGTA393400.05.1969824145
TCGGAAG682400.05.089007145
GTCGTGT415500.05.0252533145
Produced by FastQC (version 0.11.5)