FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54954554
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54850.08.326495145
AGCGTCG486800.05.5546484145
CGTCGTG440250.05.4997816145
CGTGTAG447400.05.460498145
GAGCGTC544350.05.4468246145
ATCGGAA720700.05.4015465145
GTCGTGT451000.05.3526154145
GCGTCGT447200.05.2034955140-144
Produced by FastQC (version 0.11.5)