FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753592

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753592
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54805727
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG55400.07.4595723145
GCGTCGT458950.05.5764546145
TCGGAAG732950.05.460263145
CGTCGTG448950.05.361532145
AGCGTCG496050.05.203234145
GAGCGTC559250.05.185646145
CGTGTAG458000.05.1131186145
GATCGGA733900.05.058036145
GTCGTGT458800.05.025191145
Produced by FastQC (version 0.11.5)