FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55025892
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG51900.08.097311145
AGCGTCG477000.05.8633943145
CGTCGTG431150.05.5458198145
AGATCGG746150.05.535144145
TCGTGTA419800.05.505902145
GCGTCGT440100.05.4988933145
GTCGTGT444700.05.360545145
GATCGGA709050.05.048127145
Produced by FastQC (version 0.11.5)