FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54284808
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG95700.08.63508945-49
ATCGGAA521950.07.61712362
GATCGGA519250.07.5519161
TCGGAAG521650.07.5101793
CGTATGC113000.07.492698745-49
CGGAAGA531100.07.439354
CTCGTAT107600.07.35675740-44
TCTCGTA113450.07.24577140-44
TGCCGTC128250.06.60176250-54
GCCGTCT132500.06.357181550-54
TCGTATG127850.06.327575745-49
ATGCCGT134750.06.315579445-49
AGATCGG530100.06.1545277145
ACACGTC353300.05.95106145
TAGATCG230800.05.8427477145
ATCTCGT143000.05.768757340-44
CGTCTTC159750.05.644869350-54
AGAGCAC779100.05.4615578
CGTCTGA317450.05.2984962145
GAGCACA818350.05.27932939
Produced by FastQC (version 0.11.5)