FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53883169
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC460750.08.6228029
AGAGCGT521800.07.75288448
AAGAGCG599300.06.8107877
ATCGGAA613100.06.69320342
TCGGAAG614600.06.65315153
GATCGGA609250.06.5991491
CGGAAGA628050.06.5105384
CGCCGTA132100.06.245098645-49
GCGTCGG49700.05.6885757145
CGTCGTG369950.05.525879145
TCGCCGT147500.05.52426145-49
GCCGTAT154750.05.50904845-49
CCGTATC164150.05.281945-49
Produced by FastQC (version 0.11.5)