FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753637

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753637
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63311322
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATAGA231900.07.131759145
ACGATAG240100.06.61629145
ACACGTC607650.06.243251145
TCGGAAG905350.06.1372643145
TCACGAT310700.06.116777145
GTCACGA290350.05.9459014145
CGTCTGA543850.05.935311145
ACGTCTG602500.05.8752365145
CACGATA273850.05.8273687145
AGTCACG336200.05.782287145
TAGATCG373050.05.7166667145
ATCGGAA917800.05.674649145
CTCGTAT138250.05.6665826145
CACGTCT653300.05.6293454145
AGATCGG966300.05.569991145
GATCGGA922300.05.4346104145
TATGCCG116250.05.3662148145
CGGAAGA903150.05.3651166145
CACACGT766150.05.3019643145
GCACACG774250.05.0310154145
Produced by FastQC (version 0.11.5)