FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63311322
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG56050.010.867732145
CGTCGTG594950.06.3015203145
CGTGTAG582700.05.9610915145
AGCGTCG650650.05.940391145
TCGTGTA576600.05.822931145
GCGTCGT605350.05.666209140-144
TCGGAAG967100.05.616241145
GTCGTGT600750.05.5405664145
AAGAGCG894250.05.343942145
GAGCGTC731000.05.3271165145
ATCGGAA966700.05.250995145
AGATCGG1020200.05.181762145
GATCGGA974550.05.0152326145
Produced by FastQC (version 0.11.5)