FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753643

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753643
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63845381
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGATAG252200.06.993078145
GTCACGA300100.06.674985145
CGATAGA239400.06.5484242145
CGTCTGA574750.06.4149303145
CTCGTAT145450.06.0378013145
ACACGTC649050.06.0272303145
ACGTCTG646650.05.9485865145
AGTCACG346650.05.8414435145
TCACGAT322550.05.782868145
CACGTCT698400.05.757219145
CACGATA287000.05.7405186145
GATCGGA981600.05.7080784145
TCGGAAG960400.05.622481145
GCACACG814000.05.465668145
AGATCGG1021900.05.397745145
CGGAAGA955950.05.3373704145
ATCGGAA973450.05.2115955145
CGTATGC146600.05.1488066145
TAGATCG385100.05.052662140-144
CACACGT806400.05.022164145
Produced by FastQC (version 0.11.5)