FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64168306
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATAGA241850.07.1133804145
ACGATAG247000.06.965064145
GTCACGA299800.06.634263145
CTCGTAT138150.06.200188145
CGTCTGA562150.06.1852474145
AGTCACG349050.06.0933166145
TCACGAT317350.06.0386405145
ACACGTC635000.05.8757477145
GATCGGA968150.05.788265145
TCTCGTA151900.05.686734145
AGATCGG1015200.05.634409145
CACGATA282400.05.6220083140-144
CGGAAGA944850.05.48541145
ATCGGAA957950.05.43313145
ACGTCTG629000.05.4124756145
TAGATCG382750.05.329235145
CACGTCT680800.05.299204145
TCGGAAG948250.05.220778145
CACACGT798350.05.2190604145
GCACACG809100.05.212519145
Produced by FastQC (version 0.11.5)