FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753647

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753647
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64259762
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATAGA250150.07.63471145
ACGATAG259850.06.818745145
CGTCTGA585800.06.545185145
ACACGTC659050.06.368642145
AGTCACG353800.06.1779733145
TCACGAT325750.06.1080627145
GTCACGA306250.05.9990396145
GATCGGA1010250.05.9947977145
TCTCGTA159250.05.9735036145
ACGTCTG652100.05.8463182145
CACGATA294650.05.742312145
CGTATGC143050.05.736248145
CTCGTAT149550.05.7297134145
CACGTCT700050.05.60147145
TCGGAAG983800.05.558089145
AGATCGG1054750.05.4527173145
GCACACG829100.05.3514514145
ATCGGAA997350.05.3296757145
TATGCCG116500.05.298224145
CGGAAGA977750.05.1394377145
Produced by FastQC (version 0.11.5)