FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57783979
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG48700.09.081806145
GAGCGTC491700.06.3849726145
AGCGTCG425300.06.2055087145
CGTCGTG385600.06.1862893145
ACCGCGC154200.06.08369971
GATCGGA666800.06.0675025145
TCGTGTA383050.05.811045145
ATCGGAA664250.05.7851644145
GCGTCGT392000.05.6660943140-144
CGTGTAG399600.05.661095145
TCGGAAG661000.05.638103145
CGCGATC94750.05.43368533
AGATCGG702150.05.4109406145
TAGATCG266700.05.4100523145
GTCGTGT402000.05.392827145
GCGCGAT93850.05.33831932
CTCACGC461250.05.31368353
GCTCACG471600.05.29632232
CGGAAGA667200.05.227095145
CGCCGTA89200.05.2021933145
Produced by FastQC (version 0.11.5)