FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64925058
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACGCT289350.07.468068145
ACACGTC744050.06.5393686145
ACAACGC299900.06.334908145
ACGTCTG733950.06.2835646145
CGTCTGA658650.05.9560456145
GATCGGA1177500.05.899566145
GCACACG925950.05.8264074145
TAGATCG467850.05.781195145
CACGTCT787100.05.7579193145
AGATCGG1220750.05.72619145
TCGGAAG1137400.05.6676626145
CTCGTAT166300.05.6248755145
TCTCGTA179000.05.5903826145
ATCGGAA1159450.05.5223527145
AACGCTT304650.05.4982724145
CGCTTAA238500.05.471853140-144
CACACGT906800.05.3976874145
ACGCTTA244400.05.3931556140-144
CGGAAGA1124000.05.330578140-144
TATGCCG134000.05.303184145
Produced by FastQC (version 0.11.5)