FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64925058
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG53300.016.603346145
CGTGTAG698550.06.3654037145
CGTCGTG726050.06.2441955145
AGCGTCG799050.06.163946145
TCGTGTA695700.05.995271145
GAGCGTC884800.05.8617043145
GTCGTGT724300.05.8386583145
GCGTCGT748200.05.7630143140-144
GATCGGA1224400.05.693287145
AGAGCGT963050.05.551133145
GTCGCCG187200.05.5023155145
AGATCGG1269650.05.4218216145
TCGGAAG1181800.05.4074802145
GTGGTCG240500.05.338524145
ATCGGAA1205450.05.3134246145
AAGAGCG1076050.05.291761145
CGCCGTA145500.05.284524145
AGAGCGG164750.05.283465145
CGGAAGA1173500.05.1248612140-144
TAGATCG465850.05.1072927145
Produced by FastQC (version 0.11.5)