FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753671

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753671
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67626807
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACAACGC330100.06.861762145
CGTCTGA718250.06.6104136145
CACAACG385950.06.3954988145
ACGCTTA274050.06.384308145
CGCTTAA257250.06.3779283145
ACGTCTG793200.06.1871486145
AACGCTT334600.06.075173145
CAACGCT319500.05.998734145
TCGGAAG1240000.05.895686145
ACACGTC813800.05.8788757145
CACGTCT853950.05.857514145
GCACACG1009650.05.7739267145
GATCGGA1291850.05.726492145
AGATCGG1338000.05.6374927145
ATCGGAA1270550.05.605364145
CGGAAGA1227500.05.547635145
CACACGT1000750.05.5205913145
ATCTCGT235500.05.487262145
TAGATCG510300.05.3918796145
CTCGTAT181600.05.197016145
Produced by FastQC (version 0.11.5)