FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67386327
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGCTTA277400.07.170139145
CAACGCT322450.06.7086844145
ACACGTC824900.06.608793145
CGTCTGA725550.06.6032853145
TAGATCG510700.06.0836105145
CGCTTAA260400.05.993506145
TATGCCG149250.05.9823833145
ACGTCTG806900.05.955548145
ACAACGC332250.05.9427495145
CACAACG389950.05.8638806145
AACGCTT337900.05.778932145
CACGTCT862950.05.770613145
AGATCGG1331550.05.66969145
GATCGGA1283800.05.643086145
CGGAAGA1227200.05.572102145
ATCGGAA1267150.05.436528145
GCACACG1013100.05.402596145
ATCTCGT233850.05.4012637145
TCGGAAG1242000.05.3654304145
CACACGT1004800.05.223266145
Produced by FastQC (version 0.11.5)