FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753679

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753679
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67996740
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACGCT325350.06.8079724145
ACGCTTA280600.06.4443693145
ACAACGC340450.06.3993616145
AACGCTT347550.06.310422145
ACGTCTG827100.06.2779346145
ACACGTC851300.06.2615547145
CGCTTAA263400.06.2586236145
CGTCTGA750350.06.0974097145
CGTATGC184350.05.9878263145
CACAACG390200.05.8998466145
GATCGGA1337800.05.868178145
CACGTCT893400.05.820172145
AGATCGG1389500.05.7752724145
TCGGAAG1282350.05.731162145
TAGATCG532550.05.631945145
ATCGGAA1314550.05.6294484145
ATCTCGT242500.05.570189145
CGGAAGA1266450.05.522135145
CACACGT1037250.05.391083145
TATGCCG152900.05.3671002145
Produced by FastQC (version 0.11.5)