FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67996740
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG51300.013.710181145
CGTGTAG791800.06.4651423145
CGTCGTG837100.06.3751335145
CGCCGTA161250.06.205377145
TCGTGTA799350.06.131949145
AGCGTCG910650.05.931897145
GTCGTGT829000.05.930127145
GAGCGTC1001650.05.9286623145
GTGGTCG267750.05.876505145
GCGTCGT857500.05.7723665140-144
GATCGGA1386200.05.6805816145
AGATCGG1439000.05.6132355145
TGGTCGC241150.05.5625415145
TAGATCG530950.05.4898596145
AGAGCGT1089650.05.4897904145
TCGGAAG1333900.05.468441145
AAGAGCG1205650.05.45475145
ATCGGAA1358050.05.429928145
GTCGCCG205150.05.4076524145
CGGAAGA1322550.05.296072145
Produced by FastQC (version 0.11.5)