FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61678072
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGATC110350.09.792843
ACCGCGC170550.09.6979531
GCGCGAT110750.09.1055312
ACCGCAC162100.08.017031
GGCGCGA133400.07.85988761
CTCACGC513800.07.8200653
GCTCACG526200.07.7209622
CCGCGCC244950.06.8417742
GCGATCT231050.06.65419244
ACACGTC499550.06.588064145
ACTGCGC178550.06.49267441
ACCGTGC193000.06.4656651
CGCGCCC200700.06.3239063
ATCGGAA767700.06.203757145
CCGCACC184400.06.0589032
CGTCTGA442000.05.9370027145
TCACGCC686000.05.9306764
AGATCGG803900.05.906364145
CACGCCT700300.05.86893655
CGGAAGA759800.05.848468145
Produced by FastQC (version 0.11.5)