FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63740919
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG59800.010.79243145
ACCGCGC186600.09.7380461
CGCGATC111350.08.9225863
CTCACGC546500.08.8510773
GCTCACG547800.08.7122932
GCGCGAT110300.08.6801452
CACGCCT728200.06.9783865
TCACGCC701200.06.9604334
GGCGCGA142950.06.89181661
ACGCCTG697200.06.8207596
GCGATCT229550.06.79241664
CGCCTGT757400.06.55619057
ACCGTGC212300.06.4279981
ACCGCAC187600.06.34072451
CCGCGCC308900.06.19889972
CGTCGTG559150.06.147244145
TCGTGTA545850.05.938334145
AGATCGG982150.05.7516184145
AGCGTCG615200.05.6579013145
ACTGCGC194500.05.62802171
Produced by FastQC (version 0.11.5)