FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64999330
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC175650.011.4547541
GCGCGAT118250.08.95922
CTCACGC556900.08.7752653
CGCGATC116650.08.7641933
GCTCACG566450.08.4931632
GGCGCGA146350.07.770641
CCGCGCC268450.07.56853962
CGCGCCC220200.07.37578543
ACCGCAC177200.07.1171691
CACGCCT759200.06.9417925
ACGCCTG727900.06.8419266
TCACGCC737300.06.79534244
CGCCTGT790100.06.61525447
GCGATCT245450.06.5874814
GATCGGA942750.06.3471394145
ACCGTGC204050.06.2521061
ACACGTC608850.06.082852145
CGGAAGA917850.05.925943145
AGATCGG982350.05.8768992145
CGTCTGA543750.05.8762565145
Produced by FastQC (version 0.11.5)