FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64972752
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCGC180300.010.2436961
CGCGATC121150.09.2163163
GCGCGAT120450.08.6083082
CTCACGC558750.08.2657453
GCTCACG572050.07.7572172
GGCGCGA147800.07.3886271
ACCGCAC175050.07.2851591
CACGCCT759600.06.6611225
GCGATCT253800.06.6548694
CCGCGCC274800.06.6492452
TCACGCC740200.06.60063934
ACCGTGC202500.06.5509671
ACTGCGC184650.06.5491741
AGATCGG965250.06.46277145
ACGCCTG733500.06.45342456
CGCCTGT798050.06.4310227
CGCGCCC222550.06.32024963
CGCAATC113900.06.3019013
GATCGGA920700.06.2312374145
ATCGGAA911400.06.2310762145
Produced by FastQC (version 0.11.5)