FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005753714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005753714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58954008
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG54200.013.5114565145
ACCGCGC154500.06.07319641
AGCGTCG594700.06.0473323145
CGTCGTG535650.06.02364145
ATCGGAA901300.05.864598145
GCGTCGT552050.05.8315587145
TCGTGTA525850.05.804974145
GAGCGTC666100.05.747442145
GTCGTGT542800.05.6771345145
CGCCGTA109700.05.618138145
AGATCGG958150.05.5771728145
CGTGTAG535450.05.5654845145
TCGGAAG887900.05.47947145
GATCGGA911550.05.4168487145
GGTCGCC180950.05.4094768145
CGCGATC99600.05.38743353
CGGAAGA892550.05.3046985145
AAGAGCG820500.05.2844853145
CTCACGC467900.05.23809343
AGAGCGT725700.05.132337140-144
Produced by FastQC (version 0.11.5)